BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G07SP1|AL430437
(577 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1677 218 9e-57
>3x_Contig1677
Length = 15081
Score = 218 bits (103), Expect = 9e-57
Identities = 191/232 (82%), Gaps = 6/232 (2%)
Strand = Plus / Minus
Query: 222 atraagatggttatcattagyattaacggcawgaagtwttarcwttastawtgktcatta 281
|| ||||||||||| ||||| |||||||| | ||||| ||| | ||| | || ||||||
Sbjct: 12567 atgaagatggttattattagtattaacgg-atgaagtattagcattag-aatggtcatta 12510
Query: 282 ttattkgttgwwktaccaawtatttggttcwtttcaatsaaatcttgtatakgctccttg 341
||||| |||| |||||| |||||||||| | ||||| |||||||||||| ||||||||
Sbjct: 12509 ttattggttgaagtaccaaatatttggttcatgtcaatgaaatcttgtataggctccttg 12450
Query: 342 gccaagttggwyktwtaaagtggcacasaactkatcgcgttcatattgtgakawttttta 401
|||||||||| |||||||||||| |||| |||||||||||||||||| | ||| ||
Sbjct: 12449 gccaagttggacgaataaagtggcacagaactgatcgcgttcatattgtgagagtttgta 12390
Query: 402 ctgggacgtwtccgttkttatggygtagttctttacasacgtcattatactc 453
|||||| || ||||| | ||| | || |||||||| ||||||||||||||
Sbjct: 12389 ctggga-gtagccgttgtaatg--ggag-tctttacagacgtcattatactc 12342
Score = 142 bits (67), Expect = 8e-34
Identities = 112/137 (81%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 1 gatctatattgagtccacgcaataccagtagcagtcccaawgasaggaccaccacatwga 60
||||||||||||||||| | ||||||||||||||| |||| || ||||||||||||| ||
Sbjct: 12766 gatctatattgagtccatg-aataccagtagcagtaccaatgagaggaccaccacattga 12708
Query: 61 gggycaytarcacatacgwcaaasyagwkaawttcgacatacwgcactaatgttcagatt 120
||| || || |||||||| |||| | || |||| ||||| |||||||||||| ||||
Sbjct: 12707 gggtcattagcacatacgtcaaagttgttaatttcg-catactgcactaatgttctgatt 12649
Query: 121 yacyggcsawasawtgg 137
|| ||| | | | |||
Sbjct: 12648 tactggcgatagattgg 12632
Score = 127 bits (60), Expect = 2e-29
Identities = 70/74 (94%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 494 cagcattatgktacatatarattactgttgatgttttggtgaggggtatgttgagcactt 553
|||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12307 cagcattatggtacat-tagattactgttgatgttttggtgaggggtatgttgagcactt 12249
Query: 554 tgaraactcgtttg 567
||| ||||||||||
Sbjct: 12248 tgagaactcgtttg 12235
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.47 0.725 1.38
Gapped
Lambda K H
1.47 0.725 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1299
Number of Sequences: 1807
Number of extensions: 1299
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 577
length of database: 10,358,551
effective HSP length: 15
effective length of query: 562
effective length of database: 10,331,446
effective search space: 5806272652
effective search space used: 5806272652
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.7 bits)
S1: 11 (23.8 bits)
S2: 47 (100.0 bits)